docs/dyn/genomics_v1.callsets.html - platform/external/python/google-api-python-client - Git at Google

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 <h1><a href="genomics_v1.html">Genomics API</a> . <a href="genomics_v1.callsets.html">callsets</a></h1>
 <h2>Instance Methods</h2>
 <p class="toc_element">
   <code><a href="#create">create(body, x__xgafv=None)</a></code></p>
 <p class="firstline">Creates a new call set.</p>
 <p class="toc_element">
   <code><a href="#delete">delete(callSetId, x__xgafv=None)</a></code></p>
 <p class="firstline">Deletes a call set.</p>
 <p class="toc_element">
   <code><a href="#get">get(callSetId, x__xgafv=None)</a></code></p>
 <p class="firstline">Gets a call set by ID.</p>
 <p class="toc_element">
   <code><a href="#patch">patch(callSetId, body, updateMask=None, x__xgafv=None)</a></code></p>
 <p class="firstline">Updates a call set.</p>
 <p class="toc_element">
   <code><a href="#search">search(body, x__xgafv=None)</a></code></p>
 <p class="firstline">Gets a list of call sets matching the criteria.</p>
 <p class="toc_element">
   <code><a href="#search_next">search_next(previous_request, previous_response)</a></code></p>
 <p class="firstline">Retrieves the next page of results.</p>
 <h3>Method Details</h3>
 <div class="method">
     <code class="details" id="create">create(body, x__xgafv=None)</code>
   <pre>Creates a new call set.

 For the definitions of call sets and other genomics resources, see
 [Fundamentals of Google
 Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

 Args:
   body: object, The request body. (required)
     The object takes the form of:

 { # A call set is a collection of variant calls, typically for one sample. It
       # belongs to a variant set.
       #
       # For more genomics resource definitions, see [Fundamentals of Google
       # Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
     "info": { # A map of additional call set information. This must be of the form
         # map<string, string[]> (string key mapping to a list of string values).
       "a_key": [
         "",
       ],
     },
     "name": "A String", # The call set name.
     "created": "A String", # The date this call set was created in milliseconds from the epoch.
     "sampleId": "A String", # The sample ID this call set corresponds to.
     "variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
         # have exactly length one, as a call set belongs to a single variant set.
         # This field is repeated for compatibility with the
         # [GA4GH 0.5.1
         # API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
       "A String",
     ],
     "id": "A String", # The server-generated call set ID, unique across all call sets.
   }

   x__xgafv: string, V1 error format.
     Allowed values
       1 - v1 error format
       2 - v2 error format

 Returns:
   An object of the form:

     { # A call set is a collection of variant calls, typically for one sample. It
         # belongs to a variant set.
         #
         # For more genomics resource definitions, see [Fundamentals of Google
         # Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
       "info": { # A map of additional call set information. This must be of the form
           # map<string, string[]> (string key mapping to a list of string values).
         "a_key": [
           "",
         ],
       },
       "name": "A String", # The call set name.
       "created": "A String", # The date this call set was created in milliseconds from the epoch.
       "sampleId": "A String", # The sample ID this call set corresponds to.
       "variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
           # have exactly length one, as a call set belongs to a single variant set.
           # This field is repeated for compatibility with the
           # [GA4GH 0.5.1
           # API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
         "A String",
       ],
       "id": "A String", # The server-generated call set ID, unique across all call sets.
     }</pre>
 </div>

 <div class="method">
     <code class="details" id="delete">delete(callSetId, x__xgafv=None)</code>
   <pre>Deletes a call set.

 For the definitions of call sets and other genomics resources, see
 [Fundamentals of Google
 Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

 Args:
   callSetId: string, The ID of the call set to be deleted. (required)
   x__xgafv: string, V1 error format.
     Allowed values
       1 - v1 error format
       2 - v2 error format

 Returns:
   An object of the form:

     { # A generic empty message that you can re-use to avoid defining duplicated
       # empty messages in your APIs. A typical example is to use it as the request
       # or the response type of an API method. For instance:
       #
       #     service Foo {
       #       rpc Bar(google.protobuf.Empty) returns (google.protobuf.Empty);
       #     }
       #
       # The JSON representation for `Empty` is empty JSON object `{}`.
   }</pre>
 </div>

 <div class="method">
     <code class="details" id="get">get(callSetId, x__xgafv=None)</code>
   <pre>Gets a call set by ID.

 For the definitions of call sets and other genomics resources, see
 [Fundamentals of Google
 Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

 Args:
   callSetId: string, The ID of the call set. (required)
   x__xgafv: string, V1 error format.
     Allowed values
       1 - v1 error format
       2 - v2 error format

 Returns:
   An object of the form:

     { # A call set is a collection of variant calls, typically for one sample. It
         # belongs to a variant set.
         #
         # For more genomics resource definitions, see [Fundamentals of Google
         # Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
       "info": { # A map of additional call set information. This must be of the form
           # map<string, string[]> (string key mapping to a list of string values).
         "a_key": [
           "",
         ],
       },
       "name": "A String", # The call set name.
       "created": "A String", # The date this call set was created in milliseconds from the epoch.
       "sampleId": "A String", # The sample ID this call set corresponds to.
       "variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
           # have exactly length one, as a call set belongs to a single variant set.
           # This field is repeated for compatibility with the
           # [GA4GH 0.5.1
           # API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
         "A String",
       ],
       "id": "A String", # The server-generated call set ID, unique across all call sets.
     }</pre>
 </div>

 <div class="method">
     <code class="details" id="patch">patch(callSetId, body, updateMask=None, x__xgafv=None)</code>
   <pre>Updates a call set.

 For the definitions of call sets and other genomics resources, see
 [Fundamentals of Google
 Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

 This method supports patch semantics.

 Args:
   callSetId: string, The ID of the call set to be updated. (required)
   body: object, The request body. (required)
     The object takes the form of:

 { # A call set is a collection of variant calls, typically for one sample. It
       # belongs to a variant set.
       #
       # For more genomics resource definitions, see [Fundamentals of Google
       # Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
     "info": { # A map of additional call set information. This must be of the form
         # map<string, string[]> (string key mapping to a list of string values).
       "a_key": [
         "",
       ],
     },
     "name": "A String", # The call set name.
     "created": "A String", # The date this call set was created in milliseconds from the epoch.
     "sampleId": "A String", # The sample ID this call set corresponds to.
     "variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
         # have exactly length one, as a call set belongs to a single variant set.
         # This field is repeated for compatibility with the
         # [GA4GH 0.5.1
         # API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
       "A String",
     ],
     "id": "A String", # The server-generated call set ID, unique across all call sets.
   }

   updateMask: string, An optional mask specifying which fields to update. At this time, the only
 mutable field is name. The only
 acceptable value is "name". If unspecified, all mutable fields will be
 updated.
   x__xgafv: string, V1 error format.
     Allowed values
       1 - v1 error format
       2 - v2 error format

 Returns:
   An object of the form:

     { # A call set is a collection of variant calls, typically for one sample. It
         # belongs to a variant set.
         #
         # For more genomics resource definitions, see [Fundamentals of Google
         # Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
       "info": { # A map of additional call set information. This must be of the form
           # map<string, string[]> (string key mapping to a list of string values).
         "a_key": [
           "",
         ],
       },
       "name": "A String", # The call set name.
       "created": "A String", # The date this call set was created in milliseconds from the epoch.
       "sampleId": "A String", # The sample ID this call set corresponds to.
       "variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
           # have exactly length one, as a call set belongs to a single variant set.
           # This field is repeated for compatibility with the
           # [GA4GH 0.5.1
           # API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
         "A String",
       ],
       "id": "A String", # The server-generated call set ID, unique across all call sets.
     }</pre>
 </div>

 <div class="method">
     <code class="details" id="search">search(body, x__xgafv=None)</code>
   <pre>Gets a list of call sets matching the criteria.

 For the definitions of call sets and other genomics resources, see
 [Fundamentals of Google
 Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

 Implements
 [GlobalAllianceApi.searchCallSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L178).

 Args:
   body: object, The request body. (required)
     The object takes the form of:

 { # The call set search request.
     "pageToken": "A String", # The continuation token, which is used to page through large result sets.
         # To get the next page of results, set this parameter to the value of
         # `nextPageToken` from the previous response.
     "variantSetIds": [ # Restrict the query to call sets within the given variant sets. At least one
         # ID must be provided.
       "A String",
     ],
     "name": "A String", # Only return call sets for which a substring of the name matches this
         # string.
     "pageSize": 42, # The maximum number of results to return in a single page. If unspecified,
         # defaults to 1024.
   }

   x__xgafv: string, V1 error format.
     Allowed values
       1 - v1 error format
       2 - v2 error format

 Returns:
   An object of the form:

     { # The call set search response.
     "nextPageToken": "A String", # The continuation token, which is used to page through large result sets.
         # Provide this value in a subsequent request to return the next page of
         # results. This field will be empty if there aren't any additional results.
     "callSets": [ # The list of matching call sets.
       { # A call set is a collection of variant calls, typically for one sample. It
             # belongs to a variant set.
             #
             # For more genomics resource definitions, see [Fundamentals of Google
             # Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
           "info": { # A map of additional call set information. This must be of the form
               # map<string, string[]> (string key mapping to a list of string values).
             "a_key": [
               "",
             ],
           },
           "name": "A String", # The call set name.
           "created": "A String", # The date this call set was created in milliseconds from the epoch.
           "sampleId": "A String", # The sample ID this call set corresponds to.
           "variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
               # have exactly length one, as a call set belongs to a single variant set.
               # This field is repeated for compatibility with the
               # [GA4GH 0.5.1
               # API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
             "A String",
           ],
           "id": "A String", # The server-generated call set ID, unique across all call sets.
         },
     ],
   }</pre>
 </div>

 <div class="method">
     <code class="details" id="search_next">search_next(previous_request, previous_response)</code>
   <pre>Retrieves the next page of results.

 Args:
   previous_request: The request for the previous page. (required)
   previous_response: The response from the request for the previous page. (required)

 Returns:
   A request object that you can call 'execute()' on to request the next
   page. Returns None if there are no more items in the collection.
     </pre>
 </div>

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	<h1><a href="genomics_v1.html">Genomics API</a> . <a href="genomics_v1.callsets.html">callsets</a></h1>
	<h2>Instance Methods</h2>
	<p class="toc_element">
	<code><a href="#create">create(body, x__xgafv=None)</a></code></p>
	<p class="firstline">Creates a new call set.</p>
	<p class="toc_element">
	<code><a href="#delete">delete(callSetId, x__xgafv=None)</a></code></p>
	<p class="firstline">Deletes a call set.</p>
	<p class="toc_element">
	<code><a href="#get">get(callSetId, x__xgafv=None)</a></code></p>
	<p class="firstline">Gets a call set by ID.</p>
	<p class="toc_element">
	<code><a href="#patch">patch(callSetId, body, updateMask=None, x__xgafv=None)</a></code></p>
	<p class="firstline">Updates a call set.</p>
	<p class="toc_element">
	<code><a href="#search">search(body, x__xgafv=None)</a></code></p>
	<p class="firstline">Gets a list of call sets matching the criteria.</p>
	<p class="toc_element">
	<code><a href="#search_next">search_next(previous_request, previous_response)</a></code></p>
	<p class="firstline">Retrieves the next page of results.</p>
	<h3>Method Details</h3>
	<div class="method">
	<code class="details" id="create">create(body, x__xgafv=None)</code>
	<pre>Creates a new call set.

	For the definitions of call sets and other genomics resources, see
	[Fundamentals of Google
	Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

	Args:
	body: object, The request body. (required)
	The object takes the form of:

	{ # A call set is a collection of variant calls, typically for one sample. It
	# belongs to a variant set.
	#
	# For more genomics resource definitions, see [Fundamentals of Google
	# Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	"info": { # A map of additional call set information. This must be of the form
	# map<string, string[]> (string key mapping to a list of string values).
	"a_key": [
	"",
	],
	},
	"name": "A String", # The call set name.
	"created": "A String", # The date this call set was created in milliseconds from the epoch.
	"sampleId": "A String", # The sample ID this call set corresponds to.
	"variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
	# have exactly length one, as a call set belongs to a single variant set.
	# This field is repeated for compatibility with the
	# [GA4GH 0.5.1
	# API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
	"A String",
	],
	"id": "A String", # The server-generated call set ID, unique across all call sets.
	}

	x__xgafv: string, V1 error format.
	Allowed values
	1 - v1 error format
	2 - v2 error format

	Returns:
	An object of the form:

	{ # A call set is a collection of variant calls, typically for one sample. It
	# belongs to a variant set.
	#
	# For more genomics resource definitions, see [Fundamentals of Google
	# Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	"info": { # A map of additional call set information. This must be of the form
	# map<string, string[]> (string key mapping to a list of string values).
	"a_key": [
	"",
	],
	},
	"name": "A String", # The call set name.
	"created": "A String", # The date this call set was created in milliseconds from the epoch.
	"sampleId": "A String", # The sample ID this call set corresponds to.
	"variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
	# have exactly length one, as a call set belongs to a single variant set.
	# This field is repeated for compatibility with the
	# [GA4GH 0.5.1
	# API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
	"A String",
	],
	"id": "A String", # The server-generated call set ID, unique across all call sets.
	}</pre>
	</div>

	<div class="method">
	<code class="details" id="delete">delete(callSetId, x__xgafv=None)</code>
	<pre>Deletes a call set.

	For the definitions of call sets and other genomics resources, see
	[Fundamentals of Google
	Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

	Args:
	callSetId: string, The ID of the call set to be deleted. (required)
	x__xgafv: string, V1 error format.
	Allowed values
	1 - v1 error format
	2 - v2 error format

	Returns:
	An object of the form:

	{ # A generic empty message that you can re-use to avoid defining duplicated
	# empty messages in your APIs. A typical example is to use it as the request
	# or the response type of an API method. For instance:
	#
	# service Foo {
	# rpc Bar(google.protobuf.Empty) returns (google.protobuf.Empty);
	# }
	#
	# The JSON representation for `Empty` is empty JSON object `{}`.
	}</pre>
	</div>

	<div class="method">
	<code class="details" id="get">get(callSetId, x__xgafv=None)</code>
	<pre>Gets a call set by ID.

	For the definitions of call sets and other genomics resources, see
	[Fundamentals of Google
	Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

	Args:
	callSetId: string, The ID of the call set. (required)
	x__xgafv: string, V1 error format.
	Allowed values
	1 - v1 error format
	2 - v2 error format

	Returns:
	An object of the form:

	{ # A call set is a collection of variant calls, typically for one sample. It
	# belongs to a variant set.
	#
	# For more genomics resource definitions, see [Fundamentals of Google
	# Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	"info": { # A map of additional call set information. This must be of the form
	# map<string, string[]> (string key mapping to a list of string values).
	"a_key": [
	"",
	],
	},
	"name": "A String", # The call set name.
	"created": "A String", # The date this call set was created in milliseconds from the epoch.
	"sampleId": "A String", # The sample ID this call set corresponds to.
	"variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
	# have exactly length one, as a call set belongs to a single variant set.
	# This field is repeated for compatibility with the
	# [GA4GH 0.5.1
	# API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
	"A String",
	],
	"id": "A String", # The server-generated call set ID, unique across all call sets.
	}</pre>
	</div>

	<div class="method">
	<code class="details" id="patch">patch(callSetId, body, updateMask=None, x__xgafv=None)</code>
	<pre>Updates a call set.

	For the definitions of call sets and other genomics resources, see
	[Fundamentals of Google
	Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

	This method supports patch semantics.

	Args:
	callSetId: string, The ID of the call set to be updated. (required)
	body: object, The request body. (required)
	The object takes the form of:

	{ # A call set is a collection of variant calls, typically for one sample. It
	# belongs to a variant set.
	#
	# For more genomics resource definitions, see [Fundamentals of Google
	# Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	"info": { # A map of additional call set information. This must be of the form
	# map<string, string[]> (string key mapping to a list of string values).
	"a_key": [
	"",
	],
	},
	"name": "A String", # The call set name.
	"created": "A String", # The date this call set was created in milliseconds from the epoch.
	"sampleId": "A String", # The sample ID this call set corresponds to.
	"variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
	# have exactly length one, as a call set belongs to a single variant set.
	# This field is repeated for compatibility with the
	# [GA4GH 0.5.1
	# API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
	"A String",
	],
	"id": "A String", # The server-generated call set ID, unique across all call sets.
	}

	updateMask: string, An optional mask specifying which fields to update. At this time, the only
	mutable field is name. The only
	acceptable value is "name". If unspecified, all mutable fields will be
	updated.
	x__xgafv: string, V1 error format.
	Allowed values
	1 - v1 error format
	2 - v2 error format

	Returns:
	An object of the form:

	{ # A call set is a collection of variant calls, typically for one sample. It
	# belongs to a variant set.
	#
	# For more genomics resource definitions, see [Fundamentals of Google
	# Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	"info": { # A map of additional call set information. This must be of the form
	# map<string, string[]> (string key mapping to a list of string values).
	"a_key": [
	"",
	],
	},
	"name": "A String", # The call set name.
	"created": "A String", # The date this call set was created in milliseconds from the epoch.
	"sampleId": "A String", # The sample ID this call set corresponds to.
	"variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
	# have exactly length one, as a call set belongs to a single variant set.
	# This field is repeated for compatibility with the
	# [GA4GH 0.5.1
	# API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
	"A String",
	],
	"id": "A String", # The server-generated call set ID, unique across all call sets.
	}</pre>
	</div>

	<div class="method">
	<code class="details" id="search">search(body, x__xgafv=None)</code>
	<pre>Gets a list of call sets matching the criteria.

	For the definitions of call sets and other genomics resources, see
	[Fundamentals of Google
	Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)

	Implements
	[GlobalAllianceApi.searchCallSets](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variantmethods.avdl#L178).

	Args:
	body: object, The request body. (required)
	The object takes the form of:

	{ # The call set search request.
	"pageToken": "A String", # The continuation token, which is used to page through large result sets.
	# To get the next page of results, set this parameter to the value of
	# `nextPageToken` from the previous response.
	"variantSetIds": [ # Restrict the query to call sets within the given variant sets. At least one
	# ID must be provided.
	"A String",
	],
	"name": "A String", # Only return call sets for which a substring of the name matches this
	# string.
	"pageSize": 42, # The maximum number of results to return in a single page. If unspecified,
	# defaults to 1024.
	}

	x__xgafv: string, V1 error format.
	Allowed values
	1 - v1 error format
	2 - v2 error format

	Returns:
	An object of the form:

	{ # The call set search response.
	"nextPageToken": "A String", # The continuation token, which is used to page through large result sets.
	# Provide this value in a subsequent request to return the next page of
	# results. This field will be empty if there aren't any additional results.
	"callSets": [ # The list of matching call sets.
	{ # A call set is a collection of variant calls, typically for one sample. It
	# belongs to a variant set.
	#
	# For more genomics resource definitions, see [Fundamentals of Google
	# Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
	"info": { # A map of additional call set information. This must be of the form
	# map<string, string[]> (string key mapping to a list of string values).
	"a_key": [
	"",
	],
	},
	"name": "A String", # The call set name.
	"created": "A String", # The date this call set was created in milliseconds from the epoch.
	"sampleId": "A String", # The sample ID this call set corresponds to.
	"variantSetIds": [ # The IDs of the variant sets this call set belongs to. This field must
	# have exactly length one, as a call set belongs to a single variant set.
	# This field is repeated for compatibility with the
	# [GA4GH 0.5.1
	# API](https://github.com/ga4gh/schemas/blob/v0.5.1/src/main/resources/avro/variants.avdl#L76).
	"A String",
	],
	"id": "A String", # The server-generated call set ID, unique across all call sets.
	},
	],
	}</pre>
	</div>

	<div class="method">
	<code class="details" id="search_next">search_next(previous_request, previous_response)</code>
	<pre>Retrieves the next page of results.

	Args:
	previous_request: The request for the previous page. (required)
	previous_response: The response from the request for the previous page. (required)

	Returns:
	A request object that you can call 'execute()' on to request the next
	page. Returns None if there are no more items in the collection.
	</pre>
	</div>

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